Session | |
Poster - 17 Biocrystallography: Macromolecular and biological crystallography
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Presentations | |
ID: 1944
/ Poster - 17 Biocrystallography: 1
Poster session abstracts Poster Poster session abstracts ID: 1469
/ Poster - 17 Biocrystallography: 2
Poster sessions Poster Posters only: Hot structures of biological importance Keywords: SFX, MyD88, pro-inflammatory, higher-order MyD88 TIR domain higher-order assembly interactions revealed by serial femtosecond crystallography 1Australian Research Council Centre of Excellence in Advanced Molecular Imaging, Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, Victoria, Australia; 2Department of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden; 3School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland, Australia; 4Institute for Glycomics, Griffith University, Southport, Queensland, Australia; 5EMBL Australia Node in Single Molecule Science, University of New South Wales, Kensington, New South Wales, Australia; 6Institute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, Australia; 7Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK; 8Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, California, USA; 9Australian Infectious Diseases Research Centre, The University of Queensland, Brisbane, Queensland, Australia; 10These authors contributed equally: Susannah Holmes, Max T. B. Clabbers; 11Present address: Department of Biological Chemistry, University of California Los Angeles, Los Angeles, California, USA External Resource: https://www.xray.cz/iucrp/P_285
ID: 1452
/ Poster - 17 Biocrystallography: 3
Biological and macromolecular crystallography Poster Posters only: Hot structures of biological importance, Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: ubiquitin ligase x-ray crystallography Crystal structure of atypical ubiquitin ligase PCAF_N 1Nara Institute of Science and Technology; 2The University of Tokyo; 3National Center for Global Health and Medicine; 4High Energy Accelerator Research Organization (KEK) External Resource: https://www.xray.cz/iucrp/P_287
ID: 1434
/ Poster - 17 Biocrystallography: 4
Biological and macromolecular crystallography Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: beta-propeller, lectin, Photorhabdus Structural characterization of seven-bladed beta-propeller lectin family from Photorhabdus laumondii 1National Centre for Biomolecular research, Masaryk University, Brno, Czech Republic; 2Central European Institute of Technology, Brno, Czech Republic; 3Department of Biochemistry, Faculty of Science, Masaryk University, Brno, Czech Republic External Resource: https://www.xray.cz/iucrp/P_275
ID: 1591
/ Poster - 17 Biocrystallography: 5
Poster sessions Poster Keywords: tau, Alzheimer's disease, antibody, Fab domain Structural study of the inhibitory mechanism of tau recognition antibody to tau aggregation 1Osaka Medical and Pharmaceutical University, Osaka, Japan; 2Pharmacrea Kobe, Hyogo, Japan External Resource: https://www.xray.cz/iucrp/P_281
ID: 1588
/ Poster - 17 Biocrystallography: 6
Biological and macromolecular crystallography Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: non-structural proteins; avian Orthoreovirus; σNS; μNS; viroplasm Molecular-biology and structural study of Avian orthoreovirus non-structural proteins 1University of South Bohemia in České Budějovice, České Budějovice, Czech Republic; 2Biology Centre CAS, Laboratory of electron Microscopy, Ceske Budejovice, Czech Republic; 3University of Leeds, School of Molecular and Cellular Biology, The Astbury Centre for Structural Molecular Biology, Leeds, UK External Resource: https://www.xray.cz/iucrp/P_271
ID: 1594
/ Poster - 17 Biocrystallography: 7
Biological and macromolecular crystallography Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: S-layer, SlpA, Lactobacillus Surface Layer Proteins of Lactobacillus acidophilus - A Story of SlpA and SlpX 1Institute of Molecular Biosciences, University of Graz, Austria; 2Structural Biology, Crystallographic Methods group at IBMB-CSIC, Barcelona; 3Structural Biology, ICREA at IBMB-CSIC, Barcelona; 4BioTechMed, Graz; 5Field of Excellence BioHealth, University of Graz, 8010 Graz, Austria External Resource: https://www.xray.cz/iucrp/P_286
ID: 1557
/ Poster - 17 Biocrystallography: 8
Biological and macromolecular crystallography Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: lafora disease, protein targeting to glycogen (PTG), protein phosphatase 1 (PP1), The carbohydrate binding type-21 (CBM21), glycogen targeting Structural characterization of the PTG and PTG/PP1 complex 1University of Trento, Department of Cellular, Computational and Integrative Biology (CIBIO), Trento, Italy.; 2Protein Facility, Elettra Sincrotrone Trieste S.C.p.A, Italy; 3University of Padova, Department of Chemical Sciences (DiSC), Padova, Italy; 4CNR – Institute of Crystallography, Trieste, Italy External Resource: https://www.xray.cz/iucrp/P_278
ID: 1553
/ Poster - 17 Biocrystallography: 9
Poster sessions Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: x-ray biocrystallography, type IV secretion system, VirB8, multiple protein structural alignements OrfG, a VirB8-like protein encoded by an integrative and conjugative element in S. thermophilus, has a trimeric architecture with intertwined subunits that may be involved in the Gram-positive Conj-T4SS. 1CRM², Nancy, France; 2Université de Lorraine, INRAE, DynAMic, Nancy, France External Resource: https://www.xray.cz/iucrp/P_276
ID: 1481
/ Poster - 17 Biocrystallography: 10
Poster sessions Poster MS: Null Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics), Methods, instrumentation (if it does not fit to any specific topics) Keywords: native SAD, solution-free mounting tool, automation, robots A solution-free crystal-mounting platform for native SAD Faculty of Advanced Life Science, Hokkaidou University, Sapporo, Japan External Resource: https://www.xray.cz/iucrp/P_289
ID: 1531
/ Poster - 17 Biocrystallography: 11
Biological and macromolecular crystallography Poster Keywords: EHEP; akuBGL; biofuel; phlorotannin binding Structural insights into the phlorotannin binding of EHEP and akuBGL for producing biofuel from brown algae 1Faculty of Advanced Life Science, Hokkaido university; 2Graduate School of Bioscience and Bioindustry, Tokushima University External Resource: https://www.xray.cz/iucrp/P_283
ID: 1533
/ Poster - 17 Biocrystallography: 12
Poster sessions Poster MS: Null Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: C-reactive protein, monomeric C-reactive protein, CRP, C1q Structural studies of C-reactive Protein Keele University, Staffordshire, United Kingdom External Resource: https://www.xray.cz/iucrp/P_282
ID: 1698
/ Poster - 17 Biocrystallography: 13
Biological and macromolecular crystallography Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: stringent response, alarmones, stress response, X-ray crystallography Structural studies of bacterial small alarmone hydrolases Aarhus University, Aarhus, Denmark External Resource: https://www.xray.cz/iucrp/P_269
ID: 1697
/ Poster - 17 Biocrystallography: 14
Biological and macromolecular crystallography Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: Toxin-antitoxin systems, tolerance, crystallography Investigation of possible tolerance mutations in a VapBC Toxin-Antitoxin system through structure determination Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10, DK-8000, Aarhus C, Denmark External Resource: https://www.xray.cz/iucrp/P_279
ID: 1665
/ Poster - 17 Biocrystallography: 15
Poster sessions Oral/poster Posters only: Structural biology of receptors, membrane proteins Keywords: Vibrio cholerae, transcription factor, protein-protein interaction Investigations on Vibrio cholerae sensory regulator ToxR University of Graz, Graz, Austria External Resource: https://www.xray.cz/iucrp/P_280
ID: 1486
/ Poster - 17 Biocrystallography: 16
Biological and macromolecular crystallography Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: FAD-dependent oxidoreductase, glucose-methanol-choline superfamily of oxidoreductases, crystallographic fragment screening FAD-dependent oxidoreductase from Chaetomium thermophilum: Crystallographic fragment screening-based identification of putative substrates 1Institute of Biotechnology of the Czech Academy of Sciences, v.v.i., Průmyslová 595, 252 50 Vestec, Czech Republic; 2Faculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, Břehová 7, 115 19 Prague 1, Czech Republic; 3Novozymes A/S, Biologiens Vej 2, 2800 Kgs. Lyngby, Denmark, External Resource: https://www.xray.cz/iucrp/P_277
ID: 1857
/ Poster - 17 Biocrystallography: 17
Poster sessions Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: Inhibitors of human carbonic anhydrase, CA IX, carborane and cobalt bis(dicarbollide) clusters Structure-assisted design of inhibitors of CA IX enzyme based on polyhedral boron compounds 1Institute of Organic Chemistry and Biochemistry AS CR, Praha, Czech Republic; 2Institute of Inorganic Chemistry of the Czech Academy of Sciences; 3Institute of Molecular and Translational Medicine; 4Institute of Molecular Genetics of the Czech Academy of Sciences External Resource: https://www.xray.cz/iucrp/P_272
ID: 1843
/ Poster - 17 Biocrystallography: 18
Bursary application Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: ABC transporter; secondary transporter; symporter Understanding the structural and functional aspects of a novel Mg2+-citrate-binding protein Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, India, Guwahati, India Bibliography
1. Mandal, S. K., Nayak, S. G. and Kanaujia, S. P. (2021). Identification and characterization of metal uptake ABC transporters in Mycobacterium tuberculosis unveil their ligand specificity. International Journal of Biological Macromolecules, 185, 324-337. 2. Hemant, K., Mandal, S. K., Gogoi, P. and Kanaujia, S. P. (2021). Structural and functional role of invariant water molecules in matrix metalloproteinases: a data-mining approach. Journal of Biomolecular Structure and Dynamics, 1-12. 3. Chandravanshi, M., Sharma, A., Dasgupta, P., Mandal, S. K. and Kanaujia, S. P. (2019). Identification and characterization of ABC transporters for carbohydrate uptake in Thermus thermophilus HB8. Gene, 696, 135-148. 4. Mandal, S.K., Adhikari, R., Sharma, A., Chandravanshi, M., Gogoi, P. and Kanaujia, S.P. (2019). Designating ligand specificities to metal uptake ABC transporters in Thermus thermophilus HB8. Metallomics - Royal Society of Chemistry. 11, 597-612. 5. Mandal, S.K., Chandravanshi, M., Gogoi, P. and Kanaujia, S.P. (2017). In silico characterization of TTHA0596: A potential Zn2+ binding protein of ATP-binding cassette transporter. Gene Reports, 6, 132–141. 6. Deshmukh, R.A., Jagtap, S., Mandal, M.K. and Mandal, S.K. (2016). Purification, biochemical characterization and structural modelling of alkali-stable β-1,4-xylan xylanohydrolase from Aspergillus fumigatus R1 isolated from soil. BMC Biotechnology, 16 (1), 11. 7. Gogoi, P., Chandravanshi, M., Mandal, S.K., Srivastava, A. and Kanaujia, S.P. (2015). Heterogeneous behavior of metalloproteins towards metal ion binding and selectivity: insights from molecular dynamics studies. Journal of Biomolecular Structure and Dynamics, 34 (7), 1470-1485. External Resource: https://www.xray.cz/iucrp/P_284
ID: 1844
/ Poster - 17 Biocrystallography: 19
Bursary application Poster Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics) Keywords: ABC transporter, membrane asymmetry, phospholipid, transport MlaC represents a unique class of solute-binding proteins Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati (IITG), Guwahati , India Bibliography
1. Dutta, A., Chandravanshi, M. and Kanaujia, S.P. (2021). Conserved features of the MlaD domain aid the trafficking of hydrophobic molecules. Proteins: Structure, Function, and Bioinformatics. Accepted. 2. Sinha, A.K., Dutta, A., Chandravanshi, M. and Kanaujia, S.P. (2019). An insight into bacterial phospholipase C classification and their translocation through Tat and Sec pathways: A data mining study. Meta Gene. 20, 100547. 3. Adhikari, R., Singh, D., Chandravanshi, M., Dutta, A. and Kanaujia, S.P. (2017). UgpB, a periplasmic component of the UgpABCE ATP-binding cassette transporter, predominantly follows the sec translocation pathway. Meta Gene. 13, 129-139. 4. Govindu, P.C., Chakraborty, P., Dutta, A. and Gowd, K.H. (2017). Structural space of intramolecular peptide disulfides: Analysis of peptide toxins retrieved from venomous peptide databases. Computational Biology and Chemistry. 2017, 68, 194-203. 5. Dutta, H. and Dutta, A. (2016). The microbial aspect of climate change. Energy, Ecology and Environment. 1(4): 209-232. 6. Dutta, A. and Dutta, H. (2015). Some drawbacks of the higher education system in India. Current Science. 109(12), 2174-2175. 7. Dutta, H. and Dutta, A. (2012). Seminars on biodiversity-do they inspire people? Current Science. 102(5), 657. External Resource: https://www.xray.cz/iucrp/P_270
ID: 1885
/ Poster - 17 Biocrystallography: 20
Poster sessions Poster MS: Null Posters only: Macromolecular and biological crystallography (if it does not fit to any specific topics), Structural biology of enzymes Keywords: stefin, cystatin, protease inhibition, protein crystallography, cathepsin Evolutionary upgrade of stefins for secretion in parasites 1Institute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo nám. 2, Prague, 166 10, Czechia; 2Institute of Parasitology, Biology Centre of Czech Academy of Sciences, Branišovská 1160/31, České Budějovice, 370 05, Czechia; 3Institute of Parasitology, University of Zurich, Winterthurerstrasse, Zurich, CH-8057, Switzerland External Resource: https://www.xray.cz/iucrp/P_273
ID: 1868
/ Poster - 17 Biocrystallography: 21
All topics Oral/poster MS: Integrative structural biology: The next 50 years of the Protein Data Bank, Solution scattering and combined techniques for biological systems, including component dynamics system, Structural biology of receptors, signaling and membrane proteins Keywords: photosensory receptors, photobodies, integrative time-resolved structural biology, small-angle neutron scattering (SANS), fluorescence correlation spectroscopy (FCS). Light-induced oligomerization of the transcription factor EL222 1Institute of Biotechnology CAS v.v.i., Vestec, Czech Republic; 2Institut Laue-Langevin, Grenoble, France |