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Session Overview
Session
TOM4 S3: Microfluidics and fabrication
Time:
Wednesday, 11/Sept/2024:
4:15pm - 5:45pm

Session Chair: Annalisa Volpe, POLIBA, Italy
Location: A.1.6


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Presentations
4:15pm - 4:30pm
ID: 184 / TOM4 S3: 1
TOM 4 BioPhotonics and Biosensors

A microfluidic scanning flow cytometer with superior signal-to-noise-ratio for label-free characterization of small particles

Riccardo Reale1, Maryamsadat Ghoreishi1,2, Giovanna Peruzzi1, Giancarlo Ruocco1,2, Marco Leonetti1,3

1Center for Life Nano- & Neuro-Science, Italian Institute of Technology, Rome, Italy; 2Sapienza University of Rome, Rome, Italy; 3Institute of Nanotechnology of the National Research Council of Italy, CNR-NANOTEC, Rome Unit, Piazzale A. Moro 5, I-00185, Rome, Italy

Single-cell analysis without immune-specific labelling is essential across research fields, but conventional flow cytometers (FCMs) struggle with label-free analysis. We introduce a novel microfluidic scanning flow cytometer (µSFC) designed for label-free analysis within a simple microfluidic chip. Our system outperforms traditional FCMs for label-free analysis but its signal-to-noise ratio (SNR) limits the minimum detectable size. We present three modifications to enhance SNR and improve the smallest detectable particle size: additional neutral optical density filtering, a lower noise-equivalent-power photoreceiver, and laser spot size reduction. These improvements enable reliable characterization of particles as small as 3 µm. Experimental results validate the correlation between angular profile oscillations and particle size. While reliable detection down to 1 µm is achieved, further refinement is needed. The simplicity and low setup of the µSFC make it promising for integration into multi-parametric single-cell analysis systems, facilitating comprehensive cellular characterization for diagnostic and point-of-care applications.



4:30pm - 4:45pm
ID: 267 / TOM4 S3: 2
TOM 4 BioPhotonics and Biosensors

Optofluidic integrated platform for high-throughput high-resolution imaging

Federico Sala1, Petra Paiè2,1, Alessia Candeo2,1, Francesco Ceccarelli1, Roberto Osellame1, Andrea Bassi2,1, Francesca Bragheri1

1Istituto di Fotonica e Nanotecnologie, IFN - CNR, Italy; 2Dipartimento di Fisica, POlitecnico di Milano, Itlay

Imaging flow cytometry (IFC) integrates flow cytometry with optical microscopy, enabling high-throughput, multi-parameter analysis of single cells. Current 3D IFC systems face limitations related to instrumental complexity that might lead to optical misalignment or mechanical instabilities in day-by-day operation. We propose a fully integrated optofluidic platform combining reconfigurable photonic circuits and cylindrical hollow lenses for structured light sheet microscopy in a microfluidic channel. The components are fabricated using femtosecond laser irradiation and chemical etching, ensuring a high level of integration that allows durable alignment and mechanical stability.



4:45pm - 5:00pm
ID: 465 / TOM4 S3: 3
TOM 4 BioPhotonics and Biosensors

Optofluidic flow cytometer with in-plane spherical mirror for signals enhancement

Luigino Criante1, Filippo Zorzi1,2, Silvio Bonfadini1, Ludovico Aloisio1,2, Matteo Moschetta1, Filippo Storti1, Francesco Simoni3,4, Guglielmo Lanzani1

1Istituto Italiano di Tecnologia, Italy; 2Politecnico di Milano, Italy; 3Università Politecnica delle Marche, Italy; 4Institute of Applied Sciences and Intelligent Systems of CNR, 80072 Pozzuoli, Italy

Statistical analysis of properties of single microparticles, such as cells, bacteria or plastic slivers, has attracted increasing interest in recent years. In this field flow cytometry is considered the gold standard technique, but commercially available instruments are bulky, expensive, and not suitable for use in Point-of-Care (PoC) testing. Microfluidic flow cytometers, on the other hand, are small, cheap and can be used for on-site analysis. However, in order to detect small particles, they require complex geometries and the aid of external optical components. To overcome these limitations here we present an opto-fluidic flow cytometer with an integrated 3D in-plane spherical mirror for enhanced optical signal collection. As result the signal-to-noise ratio is increased by a factor of 6, enabling the detection of particle sizes down to 1.5µm. The proposed optofluidic detection scheme allows the simultaneous collection of particles fluorescence and scattering - using a single optical fiber - which is crucial to easily distinguish particle populations with different optical properties. The devices have been fully characterized using fluorescent polystyrene beads of different sizes. As a proof of concept for potential real-world applications, signals from fluorescent HEK cells and Escherichia coli bacteria were analyzed.



5:00pm - 5:15pm
ID: 308 / TOM4 S3: 4
TOM 4 BioPhotonics and Biosensors

Development of a Microfluidic Device for Blood Cells Extraction in Liquid Biopsy

Stefania Caragnano1, Angeles Ivon Rodriguez Villarreal2, Jasmina Casals Terre2, Isabella Petruzzellis1, Antonio Ancona1,3, Roberto Osellame4, Rebeca Martinez Vazquez4, Annalisa Volpe1,3

1Dipartimento Interateneo di Fisica Michelangelo Merlin, University & Polytechnic of Bari, 70126 Via Giovanni Amendola 173, Italy; 2Universitat Politecnica de Catalunya (UPC), 08222 Campus de Terrassa Carrer de Colom 1, Spain; 3CNR-IFN UOS BARI, Via Amendola 173, 70125 Bari, Italy; 4CNR-IFN UOS Milano, Piazza Leonardo da Vinci 32, 20133 Milan, Italy

This project aims to produce a microfluidic device capable of separating 6 µm and 20 µm diameters particles by inertial sorting. This Lab-on-Chip (LoC) was designed with a trapezoidal cross-section for better fluid control and effective particle manipulation at the microscopic level, as demonstrated by COMSOL simulations. The device was manufactured on a substrate of Polymethyl Methacrylate (PMMA) by femtosecond laser technology and then assembled using an innovative geometry-preserving Isopropyl alcohol-based procedure. The LoC was test with spherical plastic microparticles of two diameters (6 µm and 20 µm) suspended in distilled water. The separation efficiencies were (98.2 ± 1.6) % for 20 µm diameter particles and (70.0 ± 1.8) % for 6 µm diameter particles in good agreement with the simulation results. Finally, after a microfluidic channels’ acetone vapors treatment, the device demonstrated a good ability to separate biological particles (Red Blood Cells) at different concentrations (20%, 30%, 40%, 50%) in a PBS buffer.



5:15pm - 5:30pm
ID: 138 / TOM4 S3: 5
TOM 4 BioPhotonics and Biosensors

Tomographic volumetric bioprinting for 3D in vitro modeling of the exocrine pancreatic unit

Viola Sgarminato1, Jorge Madrid-Wolff1, Antoine Boniface1, Gianluca Ciardelli2, Chiara Tonda-Turo2, Christophe Moser1

1Laboratory of Applied Photonics Devices, Ecole Polytechnique Fédérale de Lausanne, Switzerland; 2Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Italy

Pancreatic ductal adenocarcinoma (PDAC) is a prevalent form of pancreatic cancer, contributing significantly to cancer-related mortality worldwide. Early lesions manifest within the exocrine pancreatic gland. Thus, in vitro fully human models of the exocrine pancreatic unit are needed to foster the development of more effective diagnosis and treatments. However, it is challenging to make these models anatomically and functionally relevant. Here, tomographic volumetric bioprinting was used to biofabricate human fibroblast-laden gelatin methacrylate-based pancreatic models, mimicking glandular structure. Indeed, this technique is an optically based method that uses reverse optical tomography to construct 3D objects in a layerless fashion.

Pancreatic epithelial cells, healthy or cancerous, were then seeded, and the development of a thin epithelium inside the lumen of the 3D model was demonstrated. Immunofluorescence and ELISA assays revealed higher activation of fibroblasts when they were co-cultured with cancer cells, replicating the realistic situation in vivo. To our knowledge, this is the first demonstration of a 3D bioprinted portion of pancreas that recapitulates its physiological 3-dimensional microanatomy, and which shows tumor triggered inflammation. It opens new avenues to the application of light-based additive manufacturing in tissue engineering, overcoming the difficulties associated with light scattering from cells in hydrogels.



5:30pm - 5:45pm
ID: 147 / TOM4 S3: 6
TOM 4 BioPhotonics and Biosensors

Implantable Micro-optics for label-free non-linear imaging

Mario Marini1, Davide Panzeri1, Alessandra Nardini2, Behjat S. Kariman3, Claudio Conci2, Laura Sironi1, Donato Inverso4, Emanuela Jacchetti2, Rebeca Martinez Vazquez3, Roberto Osellame3, Maddalena Collini1, Giulio Cerullo3, Manuela Teresa Raimondi2, Elmina Kabouraki5, Maria Farsari5, Nikos Kehagias6, Konstantina Tourlouki6, Giuseppe Chirico1

1Department of Physics, Università di Milano-Bicocca, Piazza della Scienza 3, 20126, Milan, Italy; 2Department of Chemistry, Materials and Chemical Engineering “Giulio Natta”, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milan, Italy; 3Institute for Photonics and Nanotechnologies (IFN)-, CNR and Department of Physics, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milan, Italy; 4Division of Immunology, Transplantation and Infectious Diseases IRCCS San Raffaele Scientific Institute, Vita-Salute San Raffaele University, Milan, Italy.; 5FORTH/IESL Plastira 100, 70013 Heraklion, Greece; 6Institute of Nanoscience and Nanotechnology, NCSR Demokritos, Athens, Greece

Non-linear excitation microscopy offers superior in-vivo imaging but faces challenges in deep tissue. High numerical aperture beams suffer spherical aberrations, while tissue scattering impacts image quality. To address this, we propose implantable microlenses for precise focusing below the skin in lab animals. By using low numerical aperture lasers, we avoid spherical aberrations induced by high NA objectives. Our study presents various microlens designs differing in size, shape, and fabrication methods, all on glass or organo-hybrid ceramic substrates. This approach shows promise for enhancing deep tissue imaging, facilitating better understanding of biological processes in vivo.