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Conference Agenda

Overview and details of the sessions of this conference. Please select a date or location to show only sessions at that day or location. Please select a single session for detailed view (with abstracts and downloads if available).

Session Overview

Session

S1: Activity 1 - To develop the infrastructure for FAIR structural and functional annotations

Time:

Wednesday, 15/Nov/2023:

1:30pm - 3:30pm

Session Chair: Sameer Velankar

Location: Chamber Hall

PCC

Presentations

1:30pm - 1:45pm

PDBe-KB in 2023: New data pipelines and improved functionality

Mihaly Varadi, Grisell Diaz Leines, Sri D. Appasamy, Joseph I.J. Ellaway, Roshan I. Kunnakkattu, Preeti Choudhary, Sreenath S. Nair, Stephen Anyango, Sameer Velankar

Protein Data Bank in Europe, EMBL-EBI, Hinxton, United Kingdom

External Resource:

1:45pm - 2:15pm

Computational Enzymology in 3D: Modules and Mechanisms

Janet Thornton, AJM Ribeiro, Ioannis Riziotis, JD Tyzack, Neera Borkakoti, Roman Laskowski

European Bioinformatics Institute (EMBL-EBI), Wellcome > Genome Campus, Cambridge CB10 1SD, UK

External Resource:

2:15pm - 2:30pm

The Evolution of Local Energetic Frustration in Protein Families and Superfamilies

Maria I. Freiberger¹, Victoria Ruiz-Serra², Miriam Poley², Marco Ludaic², Camila Pontes², Miguel Romero², Cesar Ramirez-Sarmiento³, Marcelo Marti¹, Peter Wolynes⁴, R. Gonzalo Parra², Alfonso Valencia²

¹Buenos Aires University, Argentina; ²Barcelona Supercomputing Center, Spain; ³Pontificia Universidad Católica de Chile, Chile; ⁴Pontificia Universidad Católica de Chile, Chile

External Resource:

2:30pm - 2:45pm

Finding structure specific entity types in literature

Melanie Vollmar¹, Santosh Tirunagari², Sameer Velankar¹

¹PDBe, European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Cambridge, UK; ²Europe PMC, European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Cambridge, UK

External Resource:

2:45pm - 3:00pm

FiTMuSiC: Leveraging structural and (co)evolutionary data for protein fitness prediction.

Matsvei Tsishyn, Gabriel Cia Beriain, Pauline Hermans, Jean Marc Kwasigroch, Marianne Rooman, Fabrizio Pucci

Université Libre de Bruxelles, Belgium

External Resource:

3:00pm - 3:15pm

The MOKCa database 2023.

Biniam T Haile¹, Adnan Cinar¹, Chistopher J Richardson², Frances M G Pearl¹

¹University of Sussex, Brighton, United Kingdom; ²The Institute of Cancer Research, London, United Kingdom

External Resource:

3:15pm - 3:30pm

Developing Training Materials for Structural Biology

Paulyna Magana

EMBL-EBI, United Kingdom

External Resource: